Selected Publications

2019

COSTA JUNIOR, JOEL D. ; FARIA, ELAINE R. ; SILVA, JONATHAN A. ; GAMA, JOAO ; CERRI, RICARDO . Pruned Sets for Multi-Label Stream Classification without True Labels. In: 2019 International Joint Conference on Neural Networks (IJCNN), p. 1-8, 2019 [DOI]

COSTA JUNIOR, JOEL ; FARIA, ELAINE ; SILVA, JONATHAN ; GAMA, JOAO ; CERRI, RICARDO . Novelty Detection for Multi-Label Stream Classification. In: 8th Brazilian Conference on Intelligent Systems (BRACIS), p. 144-149, 2019 [DOI]

PEREIRA, GEAN TRINDADE ; GABRIEL, PAULO. H. R. ; CERRI, RICARDO . A lexicographic genetic algorithm for hierarchical classification rule induction. In: the Genetic and Evolutionary Computation Conference, 2019, Prague. Proceedings of the Genetic and Evolutionary Computation Conference on - GECCO, p. 846-854, 2019 [DOI]

AMARAL, D. T. ; BONATELLI, I. A. S. ; CERRI, R. ; VIVIANI, V. R. . Phylogenomic analyses and divergence time estimation of Elateroidea (Coleoptera) based on RNA-Seq data. Comparative Biochemistry and Physiology D-Genomics & Proteomics, v. 30, p. 283-289, 2019. [DOI]

CERRI, RICARDO; BASGALUPP, MÁRCIO P. ; BARROS, RODRIGO C. ; CARVALHO, ANDRÉ CARLOS P.L.F. Inducing Hierarchical Multi-label Classification rules with Genetic Algorithms. APPLIED SOFT COMPUTING, v. 77, p. 584-604, 2019. [DOI]

MASTELINI, SAULO MARTIELLO ; DA COSTA, VICTOR GUILHERME TURRISI ; SANTANA, EVERTON JOSE ; NAKANO, FELIPE KENJI ; GUIDO, RODRIGO CAPOBIANCO ; CERRI, RICARDO ; BARBON, SYLVIO. Multi-Output Tree Chaining: An Interpretative Modelling and Lightweight Multi-Target Approach. JOURNAL OF SIGNAL PROCESSING SYSTEMS FOR SIGNAL, IMAGE, AND VIDEO TECHNOLOGY (ONLINE), v. 91, p. 191-215, 2019. [DOI]

2018

SCHIETGAT, L. ; VENS, C. ; CERRI, R. ; FISCHER, C. N. ; COSTA, E. P. ; Ramon, J ; CARARETO, C. M. ; BLOCKEEL, H. A machine learning based framework to identify and classify long terminal repeat retrotransposons. PLOS COMPUTATIONAL BIOLOGY (ONLINE), v. 14, p. e1006097 [DOI]

PEREIRA, G. T. ; CERRI, RICARDO . Hierarchical and Non-Hierarchical Classification of Transposable Elements with a Genetic Algorithm. Journal of Information and Data Management - JIDM, v. 9, p. 163-178, 2018 [ON LINE]

WEHRMANN, J. ; CERRI, R. ; Barros, R. C. Hierarchical Multilabel Classification Networks. In: International Conference on Machine Learning (ICML), 2018, Stockholm, Sweden. Proceedings of the 35th International Conference on Machine Learning (ICML) [DOI]

NAKANO, F. K. ; MASTELINI, S. ; BARBON JUNIOR, S. ; CERRI, RICARDO . Improving Hierarchical Classification of Transposable Elements using Deep Neural Networks. In: International Joint Conference on Neural Networks (IJCNN 2018), 2018, Rio de Janeiro. Anais do International Joint Conference on Neural Networks (IJCNN) [DOI]

PEREIRA, G. T. ; SANTOS, B. Z. ; CERRI, RICARDO . A Genetic Algorithm for Transposable Elements Hierarchical Classification Rule Induction. In: IEEE International Congress on Evolutionary Computation, 2018, Rio de Janeiro. Anais do IEEE International Congress on Evolutionary Computation (CEC) [DOI]

CERRI, RICARDO; MANTOVANI, R. G. ; BASGALUPP, MARCIO P. ; Carvalho, A. C. P. L. F . Multi-label Feature Selection Techniques for Hierarchical Multi-label Protein Function Prediction. In: International Joint Conference on Neural Networks, 2018, Rio de Janeiro. Anais do International Joint Conference on Neural Networks (IJCNN) [DOI]

2017

WEHRMANN, JONATAS ; BARROS, RODRIGO C. ; DORES, SILVIA N. DAS ; CERRI, RICARDO. Hierarchical multi-label classification with chained neural networks. In: the Symposium, 2017, Marrakech. Proceedings of the Symposium on Applied Computing - SAC '17. New York: ACM Press, 2017. p. 790-795. [DOI]

DE ABREU, IURI BONNA M. ; MANTOVANI, RAFAEL G. ; CERRI, RICARDO. Incorporating instance correlations in multi-label classification via label-space. In: 2017 International Joint Conference on Neural Networks (IJCNN), 2017, Anchorage. 2017 International Joint Conference on Neural Networks (IJCNN), 2017. p. 581-588. [DOI]

NAKANO, FELIPE KENJI ; PINTO, WALTER JOSE ; PAPPA, GISELE LOBO ; CERRI, RICARDO. Top-down strategies for hierarchical classification of transposable elements with neural networks. In: 2017 International Joint Conference on Neural Networks (IJCNN), 2017, Anchorage. 2017 International Joint Conference on Neural Networks (IJCNN), 2017. p. 2539-2546. [DOI]

COLOMBINI, GUSTAVO G. ; DE ABREU, IURI BONNA M. ; CERRI, RICARDO. A self-organizing map-based method for multi-label classification. In: 2017 International Joint Conference on Neural Networks (IJCNN), 2017, Anchorage. 2017 International Joint Conference on Neural Networks (IJCNN), 2017. p. 4291-4298. [DOI]

NAKANO, FELIPE KENJI ; MARTIELLO MASTELINI, SAULO ; BARBON, SYLVIO ; CERRI, RICARDO. Stacking Methods for Hierarchical Classification. In: 2017 16th IEEE International Conference on Machine Learning and Applications (ICMLA), 2017, Cancun. 2017 16th IEEE International Conference on Machine Learning and Applications (ICMLA), 2017. p. 289-296. [DOI]

2016

CERRI, R.; Barros, R. C. ; Carvalho, A. C. P. L. F ; JIN, Y. Reduction strategies for hierarchical multi-label classification in protein function prediction. BMC BIOINFORMATICS, v. 17, p. 373-24, 2016. [DOI]

MANTOVANI, RAFAEL G. ; HORVATH, TOMAS ; CERRI, RICARDO ; VANSCHOREN, JOAQUIN ; CARVALHO, ANDRE C.P.L.F. DE. Hyper-Parameter Tuning of a Decision Tree Induction Algorithm. In: 2016 5th Brazilian Conference on Intelligent Systems (BRACIS), 2016, Recife. 2016 5th Brazilian Conference on Intelligent Systems (BRACIS), 2016. p. 37-42. [DOI]

2015

FISCHER, C. N. ; CARARETO, C. M. ; SANTOS, R. A. C. ; CERRI, R. ; COSTA, E. P. ; SCHIETGAT, L. ; VENS, C. Learning HMMs for Nucleotide Sequences from Amino Acid Alignments. Bioinformatics (Oxford. Print), v. 31, p. 1-3, 2015. [DOI]

CERRI, RICARDO; PAPPA, GISELE L. ; CARVALHO, ANDRE CARLOS P.L.F. ; FREITAS, ALEX A. An Extensive Evaluation of Decision Tree-Based Hierarchical Multi-Label Classification Methods and Performance Measures. Computational Intelligence, v. 31, p. 1-46, 2015. [DOI]

CERRI, RICARDO; BARROS, RODRIGO C. ; DE CARVALHO, ANDRE C. P. L. F. Hierarchical classification of Gene Ontology-based protein functions with neural networks. In: 2015 International Joint Conference on Neural Networks (IJCNN), 2015, Killarney. 2015 International Joint Conference on Neural Networks (IJCNN). p. 1-8. [DOI]